BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C12SP1|AL426015
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1410 1553 0.0
>3x_Contig1410
Length = 7640
Score = 1553 bits (782), Expect = 0.0
Identities = 798/805 (99%)
Strand = Plus / Minus
Query: 1 atgtntacattctgttacagtcccggaatttctatctcttataggactgcttttcccgga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 atgtttacattctgttacagtcccggaatttctatctcttataggactgcttttcccgga 2029
Query: 61 tagaccggctagtacctaattcgttcgaggtaacttctcgcttgacgatctttgaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 tagaccggctagtacctaattcgttcgaggtaacttctcgcttgacgatctttgaagctt 1969
Query: 121 atctcatagacaaagtgttactgatagagaagacatgtatataaagagatgtataaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 atctcatagacaaagtgttactgatagagaagacatgtatataaagagatgtataaactt 1909
Query: 181 gaaatttgtcaatgcgatcatttggttggtgggtttggcaatggttcgtcgcagagtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1908 gaaatttgtcaatgcgatcatttggttggtgggtttggcaatggttcgtcgcagagtgta 1849
Query: 241 ataccctcccataagaaagacacgaatggatcttcagtgatattagtgaaccattgcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1848 ataccctcccataagaaagacacgaatggatcttcagtgatattagtgaaccattgcgtc 1789
Query: 301 aactttgcatgttcttcacgccatttctttccgtacaaagtctcgaagatcctagtgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1788 aactttgcatgttcttcacgccatttctttccgtacaaagtctcgaagatcctagtgaaa 1729
Query: 361 ataatagcactcaaataatctgcaagggacgcacggtcaccaacgaggtacttgtggtcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1728 ataatagcactcaaataatctgcaagggacgcacggtcaccaacgaggtacttgtggtcg 1669
Query: 421 ttcaaacgttgttcgtacctttggacaagtctgtccaattctgcatatgcgttatccact 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1668 ttcaaacgttgttcgtacctttggacaagtctgtccaattctgcatatgcgtcatccact 1609
Query: 481 tttttytttttttwagggcttctgccgttcaacgggaatgcaccgcgagtaaaagctagg 540
| ||| || || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 tgtttcttattgtaagggcttctgccgttcaacgggaatgcaccgcgagtaaaagctagg 1549
Query: 541 cacaagtctgtattggcaagagatagccattgcaacacctcagctttttccttgttgccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1548 cacaagtctgtattggcaagagatagccattgcaacacctcagctttttccttgttgccc 1489
Query: 601 ttacctagtagacgctggatctcagcattgttatcgctcaagttgaccaagtaaactaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1488 ttacctagtagacgctggatctcagcattgttatcgctcaagttgaccaagtaaactaag 1429
Query: 661 attgcaagctgttgcgttaacttaaacccatcagaaccaacgtaacatggaactttcttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 attgcaagctgttgcgttaacttaaacccatcagaaccaacgtaacatggaactttcttc 1369
Query: 721 aatgggaacaacttagaccagtactctacgttgctctctggctccaagatcttaacgtcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 aatgggaacaacttagaccagtactctacgttgctctctggctccaagatcttaacgtcc 1309
Query: 781 aaactcaagcttttcacaattgcgc 805
|||||||||||||||||||||||||
Sbjct: 1308 aaactcaagcttttcacaattgcgc 1284
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4744
Number of Sequences: 1807
Number of extensions: 4744
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)